Commits · e87acb1e29c4989937b120d883c29273186f28b7 · Izaskun Mallona / polymenidou_manu_clip · GitLab

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Apr 06, 2022
- Continue Kathi's analysis; add some MEME scans · e87acb1e
  Izaskun Mallona authored 2 years ago
  
  e87acb1e
Apr 05, 2022
- Add nf-core/clipseq analysis · e79ccd8b
  Izaskun Mallona authored 2 years ago
  
  e79ccd8b
Mar 17, 2022
- Change to be able to knit the gencode version · dea5740b
  Izaskun Mallona authored 2 years ago
  
  dea5740b
Mar 16, 2022
- Update the Snakefile so it generates the 5ntclipped, R2-only STAR mappings and clipper calls · 133eff8d
  Izaskun Mallona authored 2 years ago
  
  133eff8d
- Add Kathi's postprocessing · bd5ebce9
  Izaskun Mallona authored 2 years ago
  
  bd5ebce9
Mar 15, 2022
- Add clipper AS file · 96269872
  Izaskun Mallona authored 2 years ago
  
  96269872
- Add ruleorder and few changes to be runnable (till the clkipper_peaks.bed, probably paired-end) · d6685ebe
  Izaskun Mallona authored 2 years ago
  
  d6685ebe
Mar 14, 2022
- The multiQC step raised an error; modify to generate one of the clip runs (untested) · 55f949c1
  Izaskun Mallona authored 3 years ago
  
  55f949c1
- Project start, forked from khembach Manu_TDP_clip · 898674ac
  Izaskun Mallona authored 3 years ago
  
  898674ac