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Verified Commit fa35790d authored by Marta Girona Alarcon's avatar Marta Girona Alarcon Committed by GitLab UZH
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......@@ -54,7 +54,7 @@ Table 1. List of *ex vivo* mouse number, including the injected site and contras
In the publication, we have shown the need of infusing contrast agent to achieve a semi-automatic segmentation. Here, we show a rendering of one segmentation. In the downloads, we have provided a segmentation of a timeseries imaging in the brain ventricles, which can be found under "videos_Reconstructions.7z".
![Fig. 2. Three dimensional rendering of CSF spaces enclosed in the mouse skull: Infusion of contrast agent in the lateral ventricles during high-resolution synchrotron radiation-based hard X-ray computed tomography imaging allows 3D visualization with virtual slicing in all directions. Lateral ventricles in blue, third ventricle in green, aqueduct in pink and fourth ventricle in yellow.](images/JP26-invivo-2scan-phase3-postinjection-brain-80-90min_web.png){width="600"}
![Fig. 2. Three dimensional rendering of CSF spaces enclosed in the mouse skull: Infusion of contrast agent in the lateral ventricles during high-resolution synchrotron radiation-based hard X-ray computed tomography imaging allows 3D visualization with virtual slicing in all directions. Lateral ventricles in blue, third ventricle in green, aqueduct in pink and fourth ventricle in yellow.](images/JP26-invivo-2scan-phase3-postinjection-brain-80-90min_web.png){width="900"}
### Timeseries movies
Movement of contrast agent over time for the presented timeseries can be observed in projections and reconstructions as movies under the folders "videos_Reconstructions.7z" and "videos_Projections.7z" in [Zenodo](https://doi.org/10.5281/zenodo.13773081).
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