cleaned up old references

.gitlab-ci.yml

@@ -19,7 +19,7 @@ pages:
     
   script: 
   - mkdir -p public/
-  - cp -r ./contents/ORD_index/Images* public/
+  - cp -r ./ORD_index/Images* public/
   - R -e "quarto::quarto_render(); sessionInfo()"       
   - mkdir public
   - mv ./_site/* ./public/  

ORD_index/index.qmd

@@ -14,7 +14,7 @@ format:
 
 ---
 
-This is a demo of a data index that allows to navigate through a table with metadata and thumbnail images. The idea is to facilitate finding and sharing your data. Visit our [Tutorials page](https://crsuzh.pages.uzh.ch/AFFORD_website/contents/tutorials/) for more details on the workflow of producing such a data index. In short, for the index you need: (1) a source table of structured metadata (2) if you are to display thumbnails you need the picture files (3) some R code to render the table interactive with the package [DT](https://rstudio.github.io/DT/) and (4) R Quarto to output the table as an HTML page.
+This is a demo of a data index that allows to navigate through a table with metadata and thumbnail images. The idea is to facilitate finding and sharing your data. Visit our [Tutorials page](https://crsuzh.pages.uzh.ch/AFFORD_website/tutorials/) for more details on the workflow of producing such a data index. In short, for the index you need: (1) a source table of structured metadata (2) if you are to display thumbnails you need the picture files (3) some R code to render the table interactive with the package [DT](https://rstudio.github.io/DT/) and (4) R Quarto to output the table as an HTML page.
 
 ::: {.callout-note collapse=true}
 #### More information about this example 
@@ -27,10 +27,7 @@ This demo uses a dummy dataset, i.e., the source metadata table and images have
 -   Adding some HTML code to a column value (in this case filenames) to render the images (the same approach would be done to render hyperlinks).
 :::
 
-::: {.callout-important collapse=false}
-You will find the documentation of the dummy data in the repository [Wiki](https://gitlab.uzh.ch/crsuzh/AFFORD_website/-/wikis/home) 
-:::
-
+  
 ```{r readtable}
 #| include: false
 library(dplyr)
@@ -65,7 +62,7 @@ tbl_joined  <- full_join(x=tbl,
 ```{r addhtml}
 #| include: false
 # define image paths
-pic_folder <- 'https://gitlab.uzh.ch/crsuzh/afford_website/-/tree/master/Docs/contents/ORD_index/Images'
+pic_folder <- 'https://gitlab.uzh.ch/crsuzh/afford_website/-/tree/master/Docs/ORD_index/Images'
 pic_fullpath <- file.path(pic_folder,tbl_joined$fname)
 pic_relpath <- file.path('..','..','Images',tbl_joined$fname)
 

contact/index.ipynb

-{
-  "cells": [
-    {
-      "cell_type": "markdown",
-      "metadata": {},
-      "source": [
-        "# Let us know {.unnumbered}\n",
-        "\n",
-        "\n",
-        "\n",
-        "```{html}\n",
-        "<iframe width=\"640px\" height=\"480px\" src=\"https://forms.office.com/Pages/ResponsePage.aspx?id=2zjkx2LkIkypCsNYsWmAswUwJW7ZD0ZKoSLvAZeFwxRURTk1Rkc3T1BGWFpJNDRJWVNZRkJZN081QSQlQCN0PWcu&embed=true\" frameborder=\"0\" marginwidth=\"0\" marginheight=\"0\" style=\"border: none; max-width:100%; max-height:100vh\" allowfullscreen webkitallowfullscreen mozallowfullscreen msallowfullscreen> </iframe>\n",
-        "\n",
-        "\n",
-        "```"
-      ],
-      "id": "87ea20e7"
-    }
-  ],
-  "metadata": {
-    "kernelspec": {
-      "display_name": "Python 3",
-      "language": "python",
-      "name": "python3"
-    }
-  },
-  "nbformat": 4,
-  "nbformat_minor": 5
-}
\ No newline at end of file

index.qmd

@@ -59,7 +59,7 @@ page-layout: article
 ::: {#main-listing}
 :::
 
-[Learn more about us](contents/about/index.html)
+[Learn more about us](/about/index.html)
 
 
 ::: {.callout-note appearance="minimal" collapse="true"}

templates/template_gitlab-ci.qmd

@@ -27,10 +27,9 @@ pages:
   - R -e "remotes::install_version('crosstalk', version = '1.2.1')" 
   - R -e "remotes::install_version('DT', version = '0.32')"   
   - mkdir -p public/
-  - cp -r ./Docs/contents/ORD_index/Images* public/
+  - cp -r ./contents/ORD_index/Images* public/
     
-  script: 
-  - cd Docs
+  script:   
   - R -e "quarto::quarto_render(); sessionInfo()"       
   - mv ./_site/* ../public/  
   

templates/template_quarto-yml.qmd

@@ -38,7 +38,7 @@ website:
         left: |
           Created by the [YOURTEAM](URL to your team's website)
         center: |
-            [About Us](contents/about/index.html)
+            [About Us](about/index.html)
         right: |
            This is a website under the [LICENSE NAME](URL to license web) 
           
@@ -87,7 +87,7 @@ website:
         left: |
           Created by the [YOURTEAM](URL to your team's website)
         center: |
-            [About Us](contents/about/index.html)
+            [About Us](about/index.html)
         right: |
            This is a website under the [LICENSE NAME](URL to license web) 
           

tutorials/index.ipynb

-{
-  "cells": [
-    {
-      "cell_type": "raw",
-      "metadata": {},
-      "source": [
-        "---\n",
-        "listing:\n",
-        "  categories: true\n",
-        "  type: table\n",
-        "  id: main-listing\n",
-        "  fields: [title, subtitle, date]\n",
-        "  sort-ui: true\n",
-        "  filter-ui: true\n",
-        "  contents: Tutorial*.qmd\n",
-        "\n",
-        "---"
-      ],
-      "id": "d3c6bb5e"
-    },
-    {
-      "cell_type": "markdown",
-      "metadata": {},
-      "source": [
-        "# Tutorials {.unnumbered}\n",
-        "\n",
-        "A series of practical tutorials for managing Open Research Data.\n",
-        "Use the table below or the left side bar to navigate through all tutorials.\n",
-        "\n",
-        "\n",
-        ":::{#main-listing}\n",
-        "::: \n",
-        "\n",
-        "\n",
-        "##  Version control\n",
-        "\n",
-        "\n",
-        ":::{#git-listing}\n",
-        "::: \n",
-        "\n",
-        "\n",
-        "\n",
-        "```{yml} \n",
-        "---\n",
-        "listing:\n",
-        "  categories: true\n",
-        "  type: table\n",
-        "  id: git-listing\n",
-        "  fields: [title, subtitle, date]\n",
-        "  sort-ui: true\n",
-        "  filter-ui: true\n",
-        "  contents: Tutorial*.Git.qmd\n",
-        "---\n",
-        "```"
-      ],
-      "id": "2151479f"
-    }
-  ],
-  "metadata": {
-    "kernelspec": {
-      "display_name": "Python 3",
-      "language": "python",
-      "name": "python3"
-    }
-  },
-  "nbformat": 4,
-  "nbformat_minor": 5
-}
\ No newline at end of file