Update file assembly_exercise.md

exercises/assembly_exercise.md

@@ -57,10 +57,6 @@ cp -r /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/Participants_d
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 ### Running the analysis
 
 In the assembly scripts you need to specify the variables for the input and output data. 
@@ -74,6 +70,9 @@ Submit for each platform the respective assembly script.
 
 * In your `data` space, please create a directory called `ngs`. Inside `ngs`, make a directory for each assembly approach, i.e. `nanopore`, `illumina`, `hybrid`. 
 
+The scripts here, include the assembly as well as the annotation step. 
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 * Copy the following datasets
     
     **Illumina**
@@ -96,9 +95,6 @@ Submit for each platform the respective assembly script.
 
     # copy all scripts
     cp /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/Participants_data/nanopore_scripts/*.sh /data/$USER/ngs/nanopore/
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     ```
 
     **Hybrid**