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IMMense (IMM Extended Nextflow Sequencing Environment) is a Nextflow pipeline to analyze bacterial and fungal genomes. It covers genome assembly and annotation, species identification, resistance and virulence gene analysis as well as specific modules for selected species. The pipeline's strenghts are reproducible results by using singularity containers and a thorough quality control. IMMense can be deployed single machines as well as HPC clusters.

Contains scripts for converting UZH CL corpora from XML format to a standardised PaCoCo format.

Bitcoin Core integration/staging tree. Update for the Bitcoin Core 23.0 which supports the M1 Mac processors (ARM architecture).

Rockstar for gevolution light cones

A public landing point to and source of information about the research group of Simon Aeschbacher.

PLUMED2 with DeepCV

Secret Detection scans your repository to help prevent your secrets from being exposed.

This repository offers University of Zurich students a concise guide for setting up and managing a Cardano node and stake pool, from initialization to reward withdrawal.