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UZH Science IT Infrastructure Documentation

IMMense (IMM Extended Nextflow Sequencing Environment) is a Nextflow pipeline to analyze bacterial and fungal genomes. It covers genome assembly and annotation, species identification, resistance and virulence gene analysis as well as specific modules for selected species. The pipeline's strenghts are reproducible results by using singularity containers and a thorough quality control. IMMense can be deployed single machines as well as HPC clusters.

This is the repository of the website: https://crsuzh.pages.uzh.ch/afford_repos/affordable_data_index/ This is a demo website showing a catalogue of dummy data. The 'skeleton' repository can be re-used to build a real data index. For example, you can fork this repository and fill in the content with your own data.

Preprocessing and Encoding for the Corpus Workbench (CWB) and the LiRI Corpus Platform (LCP).

Credit: Niclas Linus Bodenmann

Hier sind die Materialen abgelegt, um im Kurs Korpuspragmatik eigenständige Analysen etc. durchführen zu können.

Main site for AFFORD: A Framework for Avoiding the Open Research Data Dump

Korpuslinguistisches Denken und Programmieren im Kontext der Germanistik: eine Lernplattform (KoDuP-Germanistik)