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IMMense (IMM Extended Nextflow Sequencing Environment) is a Nextflow pipeline to analyze bacterial and fungal genomes. It covers genome assembly and annotation, species identification, resistance and virulence gene analysis as well as specific modules for selected species. The pipeline's strenghts are reproducible results by using singularity containers and a thorough quality control. IMMense can be deployed single machines as well as HPC clusters.

Contains scripts for converting UZH CL corpora from XML format to a standardised PaCoCo format.

Preprocessing and Encoding for the Corpus Workbench (CWB) and the LiRI Corpus Platform (LCP).

Credit: Niclas Linus Bodenmann

This repository offers University of Zurich students a concise guide for setting up and managing a Cardano node and stake pool, from initialization to reward withdrawal.

atomic orbital basis truncation on RT- or LR-TDHF/DFT