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### Genome assembly
- [ ] [Genome assembly](slides/230321_SP_TR_Assembly.pdf)
- [ ] [Exercise instructions](exercises/assembly_exercise.md)
- [ ] [Journal Club on Unicycler](slides/230323_Unicycler_Journal_Club_ZG.pdf)
## Typing
- [ ] [Intro to Typing](slides/230323_Blockkurs_HSS_Typing.pdf)
- [ ] [cgMLST](slides/240323_Blockkurs_HSS_cgMLST.pdf)
- [ ] [Discussion on Typing](slides/240323_Blockkurs_HSS_TypingDiscussion.pdf)
- [ ] [Journal Club on cgMLST and Salmonella](slides/230324_JournalClub_cgMLSTandSNPphylogenies_Salmonella_YG.pdf)
- [ ] [Pangenome slides](exercises/Pangenome_analysis/Pangenome.pdf)
## Phylogenetics
- [ ] [Intro to Phylogenetics](slides/230329_intro_phylogenetics.pdf)
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