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Commit d8a0ffd1 authored by Fanny Wegner's avatar Fanny Wegner
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Update file assembly_exercise.md

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...@@ -23,7 +23,7 @@ We will first do the assembly of a small test dataset together. Later, you will ...@@ -23,7 +23,7 @@ We will first do the assembly of a small test dataset together. Later, you will
```bash ```bash
# copy data # copy data
cp -r /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/testdata/illumina/01_data /data/$USER/testdata/illumina/ cp -r /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/Participants_data/testdata/illumina/01_data /data/$USER/testdata/illumina/
# copy scripts # copy scripts
cp -r /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/Participants_data/illumina/testdata/02_scripts/ /data/$USER/testdata/illumina/ cp -r /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/Participants_data/illumina/testdata/02_scripts/ /data/$USER/testdata/illumina/
...@@ -34,10 +34,10 @@ We will first do the assembly of a small test dataset together. Later, you will ...@@ -34,10 +34,10 @@ We will first do the assembly of a small test dataset together. Later, you will
```bash ```bash
# copy data # copy data
cp -r /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/testdata/nanopore/rawdata /data/$USER/testdata/nanopore/ cp -r /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/Participants_data/testdata/nanopore/rawdata /data/$USER/testdata/nanopore/
# copy scripts # copy scripts
cp /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/testdata/nanopore/*.sh /data/$USER/testdata/nanopore/ cp /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/Participants_data/testdata/nanopore/*.sh /data/$USER/testdata/nanopore/
``` ```
...@@ -46,7 +46,7 @@ We will first do the assembly of a small test dataset together. Later, you will ...@@ -46,7 +46,7 @@ We will first do the assembly of a small test dataset together. Later, you will
```bash ```bash
# copy scripts # copy scripts
cp /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/testdata/hybrid/*.sh /data/$USER/testdata/hybrid/ cp /shares/amr.imm.uzh/data/projects/Blockcourse_BIO296/FS2023/Participants_data/testdata/hybrid/*.sh /data/$USER/testdata/hybrid/
``` ```
......
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