Update file panaroo.sh

exercises/Pangenome_analysis/panaroo.sh

@@ -12,9 +12,9 @@
 module load singularityce
 
 # Declare variables
-# input data folder 
+# input data folder (01_data_upec)
 datadir=
-# results folder (03_output_mrsa)
+# results folder (03_output_upec)
 wd=
 # Path to singularity images folder
 singpath=/shares/amr.imm.uzh/bioinfo/singularity/
@@ -27,7 +27,6 @@ cd $wd
 mkdir -p panaroo/annotation_files
 mkdir -p panaroo/panaroo_output
 
-
 # generate soft links to the .gff files while looping through the sample names
 for sample_id in "${array[@]}"
 do