diff --git a/rsAbsence.Rnw b/rsAbsence.Rnw index 0764e9c7111688153f9dcffdc80e2ee8626850d5..a3917ddab7eb83694890af697cda109eacffebc5 100755 --- a/rsAbsence.Rnw +++ b/rsAbsence.Rnw @@ -237,11 +237,21 @@ rpcb <- rpcbRaw %>% effect = Effect.., internalReplication = Internal.replication.., effectType = Effect.size.type, + ## effect sizes, standard errors, p-values on original scale + ESo = Original.effect.size, + seESo = Original.standard.error, + lowerESo = Original.lower.CI, + upperESo = Original.upper.CI, po = Original.p.value, + ESr = Replication.effect.size, + seESr = Replication.standard.error, + lowerESr = Replication.lower.CI, + upperESr = Replication.upper.CI, + pr = Replication.p.value, + ## effect sizes, standard errors, p-values on SMD scale smdo = Original.effect.size..SMD., so = Original.standard.error..SMD., no = Original.sample.size, - pr = Replication.p.value, smdr = Replication.effect.size..SMD., sr = Replication.standard.error..SMD. , nr = Replication.sample.size @@ -274,6 +284,12 @@ rpcb <- rpcbRaw %>% rpcbNull <- rpcb %>% ## filter(po1 > 0.025) #? filter(po > 0.05) #? + +## ## check HR studies +## rpcb %>% +## filter(effectType == "Hazard ratio") %>% +## mutate(seESo2 = (log(upperESo) - log(lowerESo))/(2*1.96)) %>% +## select(seESo, seESo2) @