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R scripts, transcriptomic data links, and interactive analyses for the Toxoplasma gondii sporulation transcriptome atlas (Hehl Lab, University of Zurich, Vetsuisse Faculty). Includes variance filtering, UMAP/HDBSCAN clustering, differential expression (DEA), over-representation analysis (ORA), stage-specific heatmaps, UpSet and alluvial plots, and interactive network resources.
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Workshop on Reproducible Research Workflows with Quarto organized by the SwissRN academy on November 14th at Uni Dufour (Room 408), UNIGE
Website: https://crsuzh.pages.uzh.ch/workshop-quarto-2025-unige/
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