Allow more variability in input filenames
At the beginning of IMMense where it looks for input data with the pattern:
/***_{R1,R2}.fastq.gz
Could we instead allow for something like:
/***_{R1,R2}*.fastq.gz
to account for cases like the one below (received on SPSP):
BacteriaXXX_R2_001.fastq.gz
currently not recognised by IMMense and requiring manual renaming, thanks!