From b185313413592c1d9550a416bce092cc076d1e1c Mon Sep 17 00:00:00 2001
From: Fanny Wegner <fwegner@imm.uzh.ch>
Date: Tue, 21 Mar 2023 08:45:07 +0100
Subject: [PATCH] Replace UNIX_HPC_exercise_instructions.md
---
exercises/UNIX_HPC_exercise_instructions.md | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/exercises/UNIX_HPC_exercise_instructions.md b/exercises/UNIX_HPC_exercise_instructions.md
index d8a82a9..4c5d624 100644
--- a/exercises/UNIX_HPC_exercise_instructions.md
+++ b/exercises/UNIX_HPC_exercise_instructions.md
@@ -456,13 +456,12 @@ source $HOME/.bashrc
* Load the `singularityce` module
* The software for generating the MSA is called `mafft`. It is installed via its singularity image which can be found here: `/shares/amr.imm.uzh/bioinfo/singularity/mafft_7.505--hec16e2b_0.sif`.
- `mafft` is a very convenient software which recognises if you want to align DNA or Proteins automatically.
+ `mafft` is a very convenient software which can recognise if you want to align DNA or proteins automatically.
* The command for `mafft` is as follows:
```sh
mafft input.fasta > output.fasta
```
* The input fasta file is the multi-fasta file you generated in the previous exercise.
- * `mafft` is a very convenient software which recognises if you want to align DNA or Proteins automatically.
* Submit the job.
* Watch the state of the job using `squeue`.
* Explore the outplut files `[jobname].out` and `[jobname].err`
--
GitLab