From 52a80293d708d9ee296b2e4a7e99bcdee8caa0f3 Mon Sep 17 00:00:00 2001 From: Fanny Wegner <fwegner@imm.uzh.ch> Date: Thu, 9 Mar 2023 10:43:06 +0100 Subject: [PATCH] Update file README.md --- README.md | 38 +++++++++++++++++++++++--------------- 1 file changed, 23 insertions(+), 15 deletions(-) diff --git a/README.md b/README.md index cd022ac..7617c9b 100644 --- a/README.md +++ b/README.md @@ -2,20 +2,6 @@ Welcome to the home page of the Microbial Bioinformatics course. -## Course material - - -### Introduction to UNIX and HPC -- [ ] [Introduction to UNIX slides](slides/introduction_UNIX_HPC.pdf) -- [ ] [Exercise instructions](exercises/UNIX_HPC_exercise_instructions.md) -- [ ] [Cheat sheet](exercises/UNIX_HPC_cheat_sheet.md) - - -### Assembly -- [ ] [Exercise instructions](exercises/assembly_exercise_instructions.md) - - - ## Getting started ### Windows @@ -31,7 +17,7 @@ Please download and install one the two command line tools to connect to Science There is already an application called **Terminal** installed on your system. -## Other software +### Other software **Figtree** (https://github.com/rambaut/figtree/releases) - Software to visualise phylogenetic trees. Please download and unpack/install the - zip for Windows @@ -41,6 +27,28 @@ There is already an application called **Terminal** installed on your system. +## Course material + + +### Introduction to UNIX and HPC +- [ ] [Introduction to UNIX slides](slides/introduction_UNIX_HPC.pdf) +- [ ] [Exercise instructions](exercises/UNIX_HPC_exercise_instructions.md) +- [ ] [Cheat sheet](exercises/UNIX_HPC_cheat_sheet.md) + + +### Assembly +- [ ] [Exercise instructions](exercises/assembly_exercise_instructions.md) + +### Phylogenetics +- [ ] [Introduction to phylogenetics slides](slides/introduction_phylogenetics.pdf) +- [ ] [Exercise instructions](exercises/phylogenetics_exercise_instructions.md) + +### MLST +- [ ] [Exercise instructions]() + + + + <br><br><br> -- GitLab